Package org.incenp.obofoundry.sssom.rdf

Class RDFReader

java.lang.Object

org.incenp.obofoundry.sssom.SSSOMReader

org.incenp.obofoundry.sssom.rdf.RDFReader

public class RDFReader
extends SSSOMReader

A parser to read a SSSOM mapping set from the RDF Turtle serialisation format.

Field Summary

Fields inherited from class org.incenp.obofoundry.sssom.SSSOMReader

assumedVersion, extraPolicy, propagationPolicy

Constructor Summary

Constructors

Constructor	Description
RDFReader(File file)	Creates a new instance that will read data from the specified file.
RDFReader(InputStream stream)	Creates a new instance that will read data from the specified stream.
RDFReader(Reader reader)	Creates a new instance that will read data from the specified reader.
RDFReader(String filename)	Creates a new instance that will read data from a file with the specified name.

Method Summary

Modifier and Type	Method	Description
MappingSet	read()	Reads a mapping set from the source file.

Methods inherited from class org.incenp.obofoundry.sssom.SSSOMReader

fillPrefixMap, setAssumedVersion, setExtraMetadataPolicy, setPropagationEnabled, setValidation, setValidationEnabled, validate

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

RDFReader

public RDFReader(File file)
          throws FileNotFoundException

Creates a new instance that will read data from the specified file.

Parameters:

file - The file to read the mapping set from.

Throws:

FileNotFoundException - If the file cannot be found.

RDFReader

public RDFReader(InputStream stream)

Creates a new instance that will read data from the specified stream.

Parameters:

stream - The stream to read the mapping set from.

RDFReader

public RDFReader(Reader reader)

Creates a new instance that will read data from the specified reader.

Parameters:

reader - The reader to read the mapping set from.

RDFReader

public RDFReader(String filename)
          throws FileNotFoundException

Creates a new instance that will read data from a file with the specified name.

Parameters:

filename - The name of the file to read the mapping set from.

Throws:

FileNotFoundException - If the file cannot be found.

Method Details

read

public MappingSet read()
                throws SSSOMFormatException,
IOException

Description copied from class: SSSOMReader

Reads a mapping set from the source file.

Specified by:

read in class SSSOMReader

Returns:

A complete SSSOM mapping set.

Throws:

SSSOMFormatException - If encountering invalid SSSOM data.

IOException - If any kind of non-SSSOM-related I/O error occurs.