Package org.incenp.obofoundry.kgcl.owl

Class ProvisionalOWLTranslator

java.lang.Object

org.incenp.obofoundry.kgcl.ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

org.incenp.obofoundry.kgcl.owl.OWLTranslator

org.incenp.obofoundry.kgcl.owl.ProvisionalOWLTranslator

All Implemented Interfaces:

org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

public class ProvisionalOWLTranslator
extends OWLTranslator

Field Summary

Fields inherited from class org.incenp.obofoundry.kgcl.owl.OWLTranslator

empty, factory, ontology, reasoner

Constructor Summary

Constructors

Constructor	Description
ProvisionalOWLTranslator(org.semanticweb.owlapi.model.OWLOntology ontology, org.semanticweb.owlapi.reasoner.OWLReasoner reasoner)

Method Summary

Modifier and Type	Method	Description
List<org.incenp.obofoundry.kgcl.model.Change>	extractProvisionalChanges(boolean remove, ZonedDateTime before)	Extracts the list of provisional changes stored as KGCL annotations within the ontology.
List<org.semanticweb.owlapi.model.OWLOntologyChange>	visit(org.incenp.obofoundry.kgcl.model.EdgeCreation v)
List<org.semanticweb.owlapi.model.OWLOntologyChange>	visit(org.incenp.obofoundry.kgcl.model.NewSynonym v)
List<org.semanticweb.owlapi.model.OWLOntologyChange>	visit(org.incenp.obofoundry.kgcl.model.NodeObsoletion v)
List<org.semanticweb.owlapi.model.OWLOntologyChange>	visit(org.incenp.obofoundry.kgcl.model.NodeObsoletionWithDirectReplacement v)
List<org.semanticweb.owlapi.model.OWLOntologyChange>	visit(org.incenp.obofoundry.kgcl.model.NodeObsoletionWithNoDirectReplacement v)
List<org.semanticweb.owlapi.model.OWLOntologyChange>	visit(org.incenp.obofoundry.kgcl.model.PlaceUnder v)

Methods inherited from class org.incenp.obofoundry.kgcl.owl.OWLTranslator

addRejectListener, doDefault, findEdges, findMatchingAnnotations, findMatchingAnnotations, getLiteral, getLiteral, onReject

Methods inherited from class org.incenp.obofoundry.kgcl.ChangeVisitorBase

visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit, visit

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProvisionalOWLTranslator

public ProvisionalOWLTranslator(org.semanticweb.owlapi.model.OWLOntology ontology,
                                org.semanticweb.owlapi.reasoner.OWLReasoner reasoner)

Method Detail

visit

public List<org.semanticweb.owlapi.model.OWLOntologyChange> visit(org.incenp.obofoundry.kgcl.model.NewSynonym v)

Specified by:

visit in interface org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

Overrides:

visit in class ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

visit

public List<org.semanticweb.owlapi.model.OWLOntologyChange> visit(org.incenp.obofoundry.kgcl.model.NodeObsoletion v)

Specified by:

visit in interface org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

Overrides:

visit in class ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

visit

public List<org.semanticweb.owlapi.model.OWLOntologyChange> visit(org.incenp.obofoundry.kgcl.model.NodeObsoletionWithDirectReplacement v)

Specified by:

visit in interface org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

Overrides:

visit in class ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

visit

public List<org.semanticweb.owlapi.model.OWLOntologyChange> visit(org.incenp.obofoundry.kgcl.model.NodeObsoletionWithNoDirectReplacement v)

Specified by:

visit in interface org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

Overrides:

visit in class ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

visit

public List<org.semanticweb.owlapi.model.OWLOntologyChange> visit(org.incenp.obofoundry.kgcl.model.EdgeCreation v)

Specified by:

visit in interface org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

Overrides:

visit in class ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

visit

public List<org.semanticweb.owlapi.model.OWLOntologyChange> visit(org.incenp.obofoundry.kgcl.model.PlaceUnder v)

Specified by:

visit in interface org.incenp.obofoundry.kgcl.model.IChangeVisitor<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

Overrides:

visit in class ChangeVisitorBase<List<org.semanticweb.owlapi.model.OWLOntologyChange>>

extractProvisionalChanges

public List<org.incenp.obofoundry.kgcl.model.Change> extractProvisionalChanges(boolean remove,
                                                                               ZonedDateTime before)

Extracts the list of provisional changes stored as KGCL annotations within the ontology.

This method basically reverts what all the visit(...) methods are doing, converting the KGCL annotations back into KGCL objects.

Parameters:

remove - If true, the annotations are removed from the ontology during the process.

before - Only return the changes that are older than the specified date. If null, all changes are returned.

Returns:

The list of provisional changes.